Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015814964.1_cds_XP_016498114.1_12180
CDS Infomation

[gene=LOC107816883] [db_xref=GeneID:107816883] [protein=VAN3-binding protein-like] [protein_id=XP_016498114.1] [location=complement(join(56637..56851,56962..57019,57141..57190,57277..57510,58149..58590,60440..60577,60940..61296))] [gbkey=CDS]
Sequence

ATGGATAGCAAATGGTGTGAGAAAAGCTTGGTTAATTTGCCAGAAAGTCCAAAAGCGCCC
ATGGAATTCTTGTCAAGATCATGGAGTGCCTCTGCTTTGCAAGTTTGCAAGGCCTTAACT
TCTTCTTCTCCTTCTCTTCTTCCCAAAGCTAGCATTGCCAATTCCTGTGCTAATATTACT
ACTACTACTACTACTACTCACTCCAATAACACAAACAGTACTAGTAGCAGTGTTATTACT
ATACCTGAGAATATCTCTGCTGAGGAAGAAGACTCTGCCAAACTTGCTGGAAATACCTTC
TCTTTTGCTTCATCTGCTACTTCTCAACTTGTTCTTGAACGCATTATGTCTCAATCTATG
CATAATGGGCAGGAGATATCACCTTTAACTTCAGGAAGATTGTCTCATAGTAGTGGACCT
CTCAATGGTTCTCTAACGGAAGAAACTGATAGCCCTCCAGTCTCTCCTTCTGAAGAGTTT
GAAGATGTTGTTAAGTACCTGAAAGCGAACAACACTCTGCAACCATTATTCACAAACGTG
AGAACAAACGGATACAGTGGAACTACAGGGCTTGCACCAAACACGCCTGGTGGCAAGACA
GTAGGGAGATGGTTAAAGGAACGGAGAGAAAAAAAGAAAGAAGAGAGCAGAGCCCAGAAC
GCACAACTTCATGCTATTGTTTCAGTAGCAGGAGTAGCTGCTTCTGTGGCTGCAATTGCT
GCAGCCACTGCAGCAGCATCGTCCACGGGCAAAGACGAACAAATGGCAAAGACGGATGCA
GCTGTTGCTTCGGCAGCAATGCTGGTAGCTGCACAGTGCGTGGAGGCTGCTGAAGCTATG
GGAGCTGACCGTGATCATCTTATGTCAGCAATTAGTTCTGCTGTAAATGTTCGTTCTCAT
GGGGATATATCAACTCTTACTGCCGCTGCTGCCACAGCTTTACGAGGAGCTGCGACATTA
AAGGCTAGGGCACTGAAGGAAGTATGGAACATAGCTGCAGTAATTCCAATAGAAAAGGGA
ATTGGTGTAGGCACAGTTCGAAACAACGATCAAACTCAAACTAATAGCAATAATTACTGC
GAGGGACTTGACATTGAAGAGAACTTTTTGGGTGTTTGTAATCAGGAACTGTTGGCTCGG
GGCCGCGAACTTCTCAAGCGAACGCGTAATGGTGATCTTCACTGGAAAATAGTCTCTGTC
TATGTTCATCGAAGTGGAGAGGTGATGCTGAAGATGAAAAGCAAACATGTGGGAAAAACT
ATCACCAAGAAAAAGAAAAATGTAGTACTAGAAGTTTACAAGGATGTACCAGCATGGCCA
GGAAGGCATTTACTTGAGGATGGTGAGAAACGCCGATATTTTGGACTAAAGACAGAAGTA
CGAGGTGTGGTTGAGTTCGAATGCAAAAATCAAAGAGAATATGAGATATGGACTCAAGGT
GTTTCAAGACTTCTCTCTATGGTGGCTGAGAGGAAGAAGAGATTTCAGAACTAA

Peptide Sequence

PEP ID

XP_016498114.1
PEP Infomation

PREDICTED: VAN3-binding protein-like [Nicotiana tabacum]
Sequence

MDSKWCEKSLVNLPESPKAPMEFLSRSWSASALQVCKALTSSSPSLLPKASIANSCANIT
TTTTTTHSNNTNSTSSSVITIPENISAEEEDSAKLAGNTFSFASSATSQLVLERIMSQSM
HNGQEISPLTSGRLSHSSGPLNGSLTEETDSPPVSPSEEFEDVVKYLKANNTLQPLFTNV
RTNGYSGTTGLAPNTPGGKTVGRWLKERREKKKEESRAQNAQLHAIVSVAGVAASVAAIA
AATAAASSTGKDEQMAKTDAAVASAAMLVAAQCVEAAEAMGADRDHLMSAISSAVNVRSH
GDISTLTAAAATALRGAATLKARALKEVWNIAAVIPIEKGIGVGTVRNNDQTQTNSNNYC
EGLDIEENFLGVCNQELLARGRELLKRTRNGDLHWKIVSVYVHRSGEVMLKMKSKHVGKT
ITKKKKNVVLEVYKDVPAWPGRHLLEDGEKRRYFGLKTEVRGVVEFECKNQREYEIWTQG
VSRLLSMVAERKKRFQN

Transcript Sequence

Gene sequence data has not been registered.